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Species belonging to selected taxon:
Brassica napus
ABOUT THIS RECORD
ID:
MNEST000283
species:
Brassica napus
miRNA family:
MIR162
source:
miRNEST
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCAG
miRNA*
GGAGGCAGCGGTTGATCGATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
AGAAAAAGGAGCGAAAGATGCT
GGAGGCAGCGGTTGATCGATC
TCTTTGTGGGAAATTTTGGAAAAAAAAACTCAAAGCATGAACAGA
TCGATAAACCTC
TGCATCCAG
CGGTCGCCACTTCATCACT
dot-bracket secondary structure
.((..(((..((((....((((
(((.((((.((((.(((((((
(.((((((.((..((((....))))....))....)))))).)))
))))).)))).)
))).)))))
)).))))..)))..))...
SIMILARITIES
miRBase
ath-MIR162a
:
0.000000000007
PMRD
ath-miR162a
:
0.000000000007
microPC
miR162
:
0.0000000001
UniProt
no hits
RFAM
MIR162_2: 8e-18
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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